Systems Biology of Pain

Head of Research Group: Univ. Prof. Manuela Schmidt

 

Artwork by Julia Regina Sondermann.

Mission statement


Research in our laboratory is driven by our motivation to decipher the dynamics of protein networks underlying vertebrate somatosensation in health, development (aging) and disease (chronic pain). Methodologically, we combine molecular biology, biochemistry and latest proteomics techniques, electrophysiology, pharmacology, mouse models of painful pathologies and in vivo virus-mediated gene transfer.

This multidisciplinary approach has enabled us to reveal ion channel-associated signaling complexes (i.e. the interactome of TRPV1, TRPA1 and Piezo2 channels) with pathological relevance for pain. Moreover, in a quantitative systems biology approach, we investigate spatiotemporal proteome dynamics both in mice and humans. Our research lives from our fruitful collaborations with basic researchers and clinicians alike facilitating forward and reverse translation of our research results.

In this way we strive to gain mechanistic insights into developmental and pain-associated plasticity – an endeavor, which lies at the heart of both understanding the molecular signature of chronic pain and identifying novel drug targets.

Team


 

Every semester we are happy to welcome 2 master students into our team.

Selected recent publications


Zeige Ergebnisse 1 - 20 von 32
Haiss P, Liu R, Xian F, Varela DG, Schmidt M, Dirsch VM et al. Evodiamine induces centrosome amplification with subsequent G2/M cell cycle arrest in primary vascular smooth muscle cells. Biochemical Pharmacology. 2025 Sep 9;242(Pt 2):117320. Epub 2025 Sep 9. doi: 10.1016/j.bcp.2025.117320

Xian F, Brenek M, Krisp C, Urbauer E, Kumar RKR, Aguanno D et al. Ultra-sensitive metaproteomics redefines the dark metaproteome, uncovering host-microbiome interactions and drug targets in intestinal diseases. Nature Communications. 2025 Jul 18;16:6644. Epub 2025 Jul 18. doi: 10.1038/s41467-025-61977-7

Sondermann JR, Barry A, Xian F, Haberl T, Gomez Varela D, Benseler F et al. Proximity labelling reveals the compartmental proteome of murine sensory neurons. bioRxiv. 2025 Jun, S. 1-53. doi: 10.1101/2025.06.13.659475

Barry AM, Sondermann JR, Lesnak JB, Xian F, Franco-Enzástiga Ú, O’Brien JA et al. Multi-omic integration with human DRG proteomics highlights TNFα signalling as a relevant sexually dimorphic pathway. Pain. 2025 Mai 20. doi: 10.1097/j.pain.0000000000003656

Lohrberg M, Mortensen LS, Thomas C, Fries F, van der Meer F, Götz A et al. Astroglial modulation of synaptic function in the non-demyelinated cerebellar cortex is dependent on MyD88 signaling in a model of toxic demyelination. Journal of Neuroinflammation. 2025 Feb 23;22(1):47. doi: 10.1186/s12974-025-03368-9

Segelcke D, Sondermann JR, Kappert C, Padier B, Görlich D, Fobker M et al. Blood proteomics and multimodal risk profiling of human volunteers after incision injury: A translational study for advancing personalized pain management after surgery. Pharmacological Research. 2025 Feb;212:107580.


Grundtner S, Sondermann JR, Xian F, Malzl D, Segelcke D, Pogatzki-Zahn EM et al. Deep proteomics and network pharmacology reveal sex- and age-shared neuropathic pain signatures in mouse dorsal root ganglia. Pharmacological Research. 2024 Dez;211:107552. Epub 2024 Dez 16. doi: 10.1016/j.phrs.2024.107552

Barry A, Price T, Schmidt M. Bulk Proteomics (DIA-MS) of Human Dorsal Root Ganglion v1 2024. doi: 10.17504/protocols.io.j8nlk8j56l5r/v1

Urbauer E, Aguanno D, Mindermann N, Omer H, Metwaly A, Krammel T et al. Mitochondrial perturbation in the intestine causes microbiota-dependent injury and gene signatures discriminative of inflammatory disease. Cell Host & Microbe. 2024 Aug 14;32(8):1347-1364.e10. doi: 10.1016/j.chom.2024.06.013

Barry A, Sondermann JR, Lesnak J, Xian F, Franco-Enzástiga Ú, O’Brien J et al. Multi-omic integration with human DRG proteomics highlights TNFα signalling as a relevant sexually dimorphic pathway. bioRxiv. 2024. doi: 10.1101/2024.12.06.626968

Gómez-Varela D, Xian F, Grundtner S, Sondermann JR, Carta G, Schmidt M. Increasing taxonomic and functional characterization of host-microbiome interactions by DIA-PASEF metaproteomics. Frontiers in Microbiology. 2023 Okt;14:1258703. doi: 10.3389/fmicb.2023.1258703

Segelcke D, van der Burgt M, Kappert C, Schmidt Garcia D, Sondermann JR, Bigalke S et al. Phenotype- and species-specific skin proteomic signatures for incision-induced pain in humans and mice. British Journal of Anaesthesia (BJA). 2023 Mär;130(3):331-342. Epub 2023 Jan 5. doi: 10.1016/j.bja.2022.10.040

Schmidt M, Sondermann JR, Gomez-Varela D, Çubuk C, Millet Q, Lewis MJ et al. Transcriptomic and proteomic profiling of NaV1.8-expressing mouse nociceptors. Frontiers in molecular neuroscience. 2022 Okt 11;15:1002842. doi: 10.3389/fnmol.2022.1002842

Segelcke D, Burgt MVD, Kappert C, Schmidt-Garcia D, Sondermann JR, Bigalke S et al. Species-specific cutaneous protein signatures upon incision injury and correlation with distinct pain-related phenotypes in humans. bioRxiv. 2022 Mär 8. doi: 10.1101/2022.03.07.482980

de Clauser L, Kappert C, Sondermann JR, Gomez-Varela D, Flatters SJL, Schmidt M. Proteome and Network Analysis Provides Novel Insights Into Developing and Established Chemotherapy-Induced Peripheral Neuropathy. Frontiers in Pharmacology. 2022 Feb 18;13:818690. doi: 10.3389/fphar.2022.818690

Segelcke D, Fischer HK, Hütte M, Dennerlein S, Benseler F, Brose N et al. Tmem160 contributes to the establishment of discrete nerve injury-induced pain behaviors in male mice. Cell Reports. 2021 Dez 21;37(12):110152. doi: 10.1016/j.celrep.2021.110152

Zhu S, Stanslowsky N, Fernández-Trillo J, Mamo TM, Yu P, Kalmbach N et al. Generation of hiPSC-derived low threshold mechanoreceptors containing axonal termini resembling bulbous sensory nerve endings and expressing Piezo1 and Piezo2. stem cell research. 2021 Okt;56:102535. doi: 10.1016/j.scr.2021.102535

Zeige Ergebnisse 1 - 20 von 32